Gene Expression
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For the richest view of the full heatmap, including all HERV groups across every cancer type, open this page on a larger screen.
Expression visualizations in ERV Navigator are provided for exploratory use only. Values were derived from preprocessed RNA-seq coverage data from recount3 (https://rna.recount.bio/) and summarized across TCGA cancer types (study and sample-type abbreviations: https://gdc.cancer.gov/resources-tcga-users/tcga-code-tables/tcga-study-abbreviations). Due to the repetitive nature of HERVs, these estimates should be interpreted as approximate indicators of transcriptional activity, not as absolute expression measurements of locus-specific HERV expression.
ACC
BLCA
BRCA
CESC
CHOL
COAD
DLBC
ESCA
GBM
HNSC
KICH
KIRC
KIRP
LGG
LIHC
LUAD
LUSC
MESO
OV
PAAD
PCPG
PRAD
READ
SARC
SKCM
STAD
TGCT
THCA
THYM
UCS
UVM
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Z-score
(log10 TPM)
(log10 TPM)